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1

Body plan of turtles: an anatomical, developmental and evolutionary perspective

Hiroshi Nagashima, Shigehiro Kuraku, Katsuhisa Uchida, Yoshie Kawashima-Ohya, Yuichi Narita, Shigeru Kuratani

Journal:

Anatomical Science International

Year:

2012

Language:

english

File:

PDF, 686 KB

english, 2012

2

Evidence from cyclostomes for complex regionalization of the ancestral vertebrate brain

Sugahara, Fumiaki, Pascual-Anaya, Juan, Oisi, Yasuhiro, Kuraku, Shigehiro, Aota, Shin-ichi, Adachi, Noritaka, Takagi, Wataru, Hirai, Tamami, Sato, Noboru, Murakami, Yasunori, Kuratani, Shigeru

Journal:

Year:

2016

Language:

english

File:

PDF, 9.81 MB

english, 2016

3

Hair follicle stem cells define a niche for tactile sensation via secretion of a specialized ECM

Cheng, Chun-Chun, Tsutsui, Ko, Taguchi, Toru, Ban-Sanzen, Noriko, Kakiguchi, Kisa, Yonemura, Shigenobu, Kuraku, Shigehiro, Watt, Fiona, Fujiwara, Hironobu

Journal:

Journal of Dermatological Science

Year:

2017

Language:

english

File:

PDF, 60 KB

english, 2017

4

Turtle–chicken chimera: An experimental approach to understanding evolutionary innovation in the turtle

Hiroshi Nagashima, Katsuhisa Uchida, Keiko Yamamoto, Shigehiro Kuraku, Ryo Usuda, Shigeru Kuratani

Journal:

Developmental Dynamics

Year:

2005

Language:

english

File:

PDF, 1.47 MB

english, 2005

5

Identification of four Engrailed genes in the Japanese lamprey, Lethenteron japonicum

Manami Matsuura, Hidenori Nishihara, Koh Onimaru, Nobuhiro Kokubo, Shigehiro Kuraku, Rie Kusakabe, Norihiro Okada, Shigeru Kuratani, Mikiko Tanaka

Journal:

Developmental Dynamics

Year:

2008

Language:

english

File:

PDF, 757 KB

english, 2008

6

Lamprey as an evo-devo model: Lessons from comparative embryology and molecular phylogenetics

Shigeru Kuratani, Shigehiro Kuraku, Yasunori Murakami

Journal:

Year:

2002

Language:

english

File:

PDF, 554 KB

english, 2002

7

Hox code in embryos of Chinese soft-shelled turtle Pelodiscus sinensis correlates with the evolutionary innovation in the turtle

Yoshie Kawashima Ohya, Shigehiro Kuraku, Shigeru Kuratani

Journal:

Journal of Experimental Zoology Part B: Molecular and Developmental Evolution

Year:

2005

Language:

english

File:

PDF, 549 KB

english, 2005

8

Revisiting the origin of the vertebrate Hox14 by including its relict sarcopterygian members

Nathalie Feiner, Rolf Ericsson, Axel Meyer, Shigehiro Kuraku

Journal:

Journal of Experimental Zoology Part B: Molecular and Developmental Evolution

Year:

2011

Language:

english

File:

PDF, 494 KB

english, 2011

9

Development of the adenohypophysis in the lamprey: Evolution of epigenetic patterning programs in organogenesis

Katsuhisa Uchida, Yasunori Murakami, Shigehiro Kuraku, Shigeki Hirano, Shigeru Kuratani

Journal:

Journal of Experimental Zoology Part B: Molecular and Developmental Evolution

Year:

2003

Language:

english

File:

PDF, 1.35 MB

english, 2003

10

The composition and ion-exchange behavior of zinc hexacyanoferrate(II) analogues

Shoichi Kawamura, Hanako Kuraku, Katsumi Kurotaki

Journal:

Analytica Chimica Acta

Year:

1970

Language:

english

File:

PDF, 538 KB

english, 1970

11

Unresolved orthology and peculiar coding sequence properties of lamprey genes: theKCNAgene family as test case

Huan Qiu, Falk Hildebrand, Shigehiro Kuraku, Axel Meyer

Journal:

Year:

2011

Language:

english

File:

PDF, 3.12 MB

english, 2011

12

Basal jawed vertebrate phylogeny inferred from multiple nuclear DNA-coded genes

Kanae Kikugawa, Kazutaka Katoh, Shigehiro Kuraku, Hiroshi Sakurai, Osamu Ishida, Naoyuki Iwabe, Takashi Miyata

Journal:

Year:

2004

Language:

english

File:

PDF, 602 KB

english, 2004

13

Ancestral and derived attributes of thedlxgene repertoire, cluster structure and expression patterns in an African cichlid fish

Adina J Renz, Helen M Gunter, Jan MF Fischer, Huan Qiu, Axel Meyer, Shigehiro Kuraku

Journal:

Year:

2011

Language:

english

File:

PDF, 2.25 MB

english, 2011

14

Protein Tyrosine Kinase cDNAs from Amphioxus, Hagfish, and Lamprey: Isoform Duplications Around the Divergence of Cyclostomes and Gnathostomes

Hiroshi Suga, Daisuke Hoshiyama, Shigehiro Kuraku, Kazutaka Katoh, Kaoru Kubokawa, Takashi Miyata

Journal:

Journal of Molecular Evolution

Year:

1999

Language:

english

File:

PDF, 552 KB

english, 1999

15

Identification and developmental expression of twoTbx1/10-related genes in the agnathanLethenteron japonicum

Eva Tiecke, Manami Matsuura, Nobuhiro Kokubo, Shigehiro Kuraku, Rie Kusakabe, Shigeru Kuratani, Mikiko Tanaka

Journal:

Development Genes and Evolution

Year:

2007

Language:

english

File:

PDF, 351 KB

english, 2007

16

cDNA-based gene mapping and GC3profiling in the soft-shelled turtle suggest a chromosomal size-dependent GC bias shared by sauropsids

Shigehiro Kuraku, Junko Ishijima, Chizuko Nishida-Umehara, Kiyokazu Agata, Shigeru Kuratani, Yoichi Matsuda

Journal:

Chromosome Research

Year:

2006

Language:

english

File:

PDF, 587 KB

english, 2006

17

A rapid separation of sodium, potassium, rubidium and caesium by thin layer chromatography on zinc ferrocyanide

Shoichi Kawamura, Katsumi Kurotaki, Hanako Kuraku, Masami Izawa

Journal:

Journal of Chromatography A

Year:

1967

Language:

english

File:

PDF, 335 KB

english, 1967

18

Rapid evolution and selection inferred from the transcriptomes of sympatric crater lake cichlid fishes

K. R. ELMER, S. FAN, H. M. GUNTER, J. C. JONES, S. BOEKHOFF, S. KURAKU, A. MEYER

Journal:

Molecular Ecology

Year:

2010

Language:

english

File:

PDF, 370 KB

english, 2010

19

Comprehensive survey of carapacial ridge-specific genes in turtle implies co-option of some regulatory genes in carapace evolution

Shigehiro Kuraku, Ryo Usuda, Shigeru Kuratani

Journal:

Evolution & Development

Year:

2005

Language:

english

File:

PDF, 3.11 MB

english, 2005

20

Unique features of Myf-5 in turtles: nucleotide deletion, alternative splicing, and unusual expression pattern

Yoshie Kawashima Ohya, Ryo Usuda, Shigehiro Kuraku, Hiroshi Nagashima, Shigeru Kuratani

Journal:

Evolution & Development

Year:

2006

Language:

english

File:

PDF, 1.75 MB

english, 2006

21

Evolutionary developmental perspective for the origin of turtles: the folding theory for the shell based on the developmental nature of the carapacial ridge

Shigeru Kuratani, Shigehiro Kuraku, Hiroshi Nagashima

Journal:

Evolution & Development

Year:

2011

Language:

english

File:

PDF, 1.70 MB

english, 2011

22

Mechanisms of heart development in the Japanese lamprey, Lethenteron japonicum

Nobuhiro Kokubo, Manami Matsuura, Koh Onimaru, Eva Tiecke, Shigehiro Kuraku, Shigeru Kuratani, Mikiko Tanaka

Journal:

Evolution & Development

Year:

2010

Language:

english

File:

PDF, 1.97 MB

english, 2010

23

Co-orthology of Pax4 and Pax6 to the fly eyeless gene: molecular phylogenetic, comparative genomic, and embryological analyses

Tereza Manousaki, Nathalie Feiner, Gerrit Begemann, Axel Meyer, Shigehiro Kuraku

Journal:

Evolution & Development

Year:

2011

Language:

english

File:

PDF, 497 KB

english, 2011

24

Evolutionary biology: Lamprey Hox genes and the evolution of jaws

Takio, Yoko, Pasqualetti, Massimo, Kuraku, Shigehiro, Hirano, Shigeki, Rijli, Filippo M., Kuratani, Shigeru

Journal:

Year:

2004

Language:

english

File:

PDF, 274 KB

english, 2004

25

Hagfish embryology with reference to the evolution of the neural crest

Ota, Kinya G., Kuraku, Shigehiro, Kuratani, Shigeru

Journal:

Year:

2007

Language:

english

File:

PDF, 1017 KB

english, 2007

26

Time Scale for Cyclostome Evolution Inferred with a Phylogenetic Diagnosis of Hagfish and Lamprey cDNA Sequences

Kuraku, Shigehiro, Kuratani, Shigeru

Journal:

Zoological Science

Year:

2006

Language:

english

File:

PDF, 715 KB

english, 2006

27

Monophyly of Lampreys and Hagfishes Supported by Nuclear DNA–Coded Genes

Kuraku, Shigehiro, Hoshiyama, Daisuke, Katoh, Kazutaka, Suga, Hiroshi, Miyata, Takashi

Journal:

Journal of Molecular Evolution

Year:

1999

Language:

english

File:

PDF, 524 KB

english, 1999

28

Tissue preferential expression of estrogen receptor gene in the marine snail, Thais clavigera

Masaaki Kajiwara, Shigehiro Kuraku, Takako Kurokawa, Kenichi Kato, Shingo Toda, Hidenori Hirose, Shigeru Takahashi, Yasuyuki Shibata, Taisen Iguchi, Toshie Matsumoto, Takashi Miyata, Takashi Miura, Yu

Journal:

General and Comparative Endocrinology

Year:

2006

Language:

english

File:

PDF, 1.93 MB

english, 2006

29

Energy enhancement in the two-stage autoacceleration scheme

Hasegawa, D., Kamada, K., Kuraku, A., Ando, R., Masuzaki, M.

Journal:

IEEE Transactions on Plasma Science

Year:

2000

Language:

english

File:

PDF, 80 KB

english, 2000

30

The origin ofbmp16, a novelBmp2/4relative, retained in teleost fish genomes

Nathalie Feiner, Gerrit Begemann, Adina J Renz, Axel Meyer, Shigehiro Kuraku

Journal:

BMC Evolutionary Biology

Year:

2009

Language:

english

File:

PDF, 2.92 MB

english, 2009

31

Pax2 modulates proliferation during specification of the otic and epibranchial placodes

Sabine Freter, Yuko Muta, Paul O'Neill, Vassil S. Vassilev, Shigehiro Kuraku, Raj K. Ladher

Journal:

Developmental Dynamics

Year:

2012

Language:

english

File:

PDF, 1.17 MB

english, 2012

32

Genomic analysis of cichlid fish ‘natural mutants’

Shigehiro Kuraku, Axel Meyer

Journal:

Current Opinion in Genetics & Development

Year:

2008

Language:

english

File:

PDF, 766 KB

english, 2008

33

Hox gene expression patterns in Lethenteron japonicum embryos—Insights into the evolution of the vertebrate Hox code

Yoko Takio, Shigehiro Kuraku, Yasunori Murakami, Massimo Pasqualetti, Filippo M. Rijli, Yuichi Narita, Shigeru Kuratani, Rie Kusakabe

Journal:

Developmental Biology

Year:

2007

Language:

english

File:

PDF, 2.35 MB

english, 2007

34

Evolution of oropharyngeal patterning mechanisms involving Dlx and endothelins in vertebrates

Shigehiro Kuraku, Yoko Takio, Fumiaki Sugahara, Masaki Takechi, Shigeru Kuratani

Journal:

Developmental Biology

Year:

2010

Language:

english

File:

PDF, 5.62 MB

english, 2010

35

Evolution of vertebrate skeletal myogenesis: Insights from the cyclostome lamprey

Rie Kusakabe, Shigehiro Kuraku, Shigeru Kuratani

Journal:

Developmental Biology

Year:

2010

Language:

english

File:

PDF, 68 KB

english, 2010

36

Expression and interaction of muscle-related genes in the lamprey imply the evolutionary scenario for vertebrate skeletal muscle, in association with the acquisition of the neck and fins

Rie Kusakabe, Shigehiro Kuraku, Shigeru Kuratani

Journal:

Developmental Biology

Year:

2011

Language:

english

File:

PDF, 1.74 MB

english, 2011

37

Hox Gene Clusters of Early Vertebrates: Do They Serve as Reliable Markers for Genome Evolution?

Shigehiro Kuraku

Journal:

Genomics, Proteomics & Bioinformatics

Year:

2011

Language:

english

File:

PDF, 481 KB

english, 2011

38

Craniofacial development of hagfishes and the evolution of vertebrates

Oisi, Yasuhiro, Ota, Kinya G., Kuraku, Shigehiro, Fujimoto, Satoko, Kuratani, Shigeru

Journal:

Year:

2012

Language:

english

File:

PDF, 2.97 MB

english, 2012

39

The Dlx genes as clues to vertebrate genomics and craniofacial evolution

Takechi, Masaki, Adachi, Noritaka, Hirai, Tamami, Kuratani, Shigeru, Kuraku, Shigehiro

Journal:

Seminars in Cell & Developmental Biology

Year:

2013

Language:

english

File:

PDF, 1.25 MB

english, 2013

40

15-P007 Evolution of vertebrate myogenesis, with special reference to the morphological variety of skeletal muscles

Rie Kusakabe, Shigehiro Kuraku, Shigeru Kuratani, Kunio Inoue

Journal:

Mechanisms of Development

Year:

2009

Language:

english

File:

PDF, 38 KB

english, 2009

41

Non-parsimonious evolution of hagfishDlxgenes

Satoko Fujimoto, Yasuhiro Oisi, Shigehiro Kuraku, Kinya G Ota, Shigeru Kuratani

Journal:

BMC Evolutionary Biology

Year:

2013

Language:

english

File:

PDF, 1.55 MB

english, 2013

42

Intra-genomic GC heterogeneity in sauropsids: evolutionary insights from cDNA mapping and GC3profiling in snake

Matsubara, Kazumi, Kuraku, Shigehiro, Tarui, Hiroshi, Nishimura, Osamu, Nishida, Chizuko, Agata, Kiyokazu, Kumazawa, Yoshinori, Matsuda, Yoichi

Journal:

Year:

2012

Language:

english

File:

PDF, 565 KB

english, 2012

43

Insights into Cyclostome Phylogenomics: Pre-2R or Post-2R

Kuraku, Shigehiro

Journal:

Zoological Science

Year:

2008

Language:

english

File:

PDF, 805 KB

english, 2008

44

Impact of asymmetric gene repertoire between cyclostomes and gnathostomes

Kuraku, Shigehiro

Journal:

Seminars in Cell & Developmental Biology

Year:

2013

Language:

english

File:

PDF, 1.21 MB

english, 2013

45

Homeogenetic inductive mechanism of segmentation in polychaete tail regeneration

Niwa, Nao, Akimoto-Kato, Ai, Sakuma, Masashi, Kuraku, Shigehiro, Hayashi, Shigeo

Journal:

Developmental Biology

Year:

2013

Language:

english

File:

PDF, 6.93 MB

english, 2013

46

Sequencing of the sea lamprey (Petromyzon marinus) genome provides insights into vertebrate evolution

Smith, Jeramiah J, Kuraku, Shigehiro, Holt, Carson, Sauka-Spengler, Tatjana, Jiang, Ning, Campbell, Michael S, Yandell, Mark D, Manousaki, Tereza, Meyer, Axel, Bloom, Ona E, Morgan, Jennifer R, Buxbau

Journal:

Nature Genetics

Year:

2013

Language:

english

File:

PDF, 1.03 MB

english, 2013

47

Developmental expression and evolution of muscle-specific microRNAs conserved in vertebrates

Tani, Saori, Kuraku, Shigehiro, Sakamoto, Hiroshi, Inoue, Kunio, Kusakabe, Rie

Journal:

Evolution & Development

Year:

2013

Language:

english

File:

PDF, 6.94 MB

english, 2013

48

Cloning and pharmacological characterization of the neuropeptide Y receptor Y5 in the sea lamprey, Petromyzon marinus

Xu, Bo, Sundström, Görel, Kuraku, Shigehiro, Lundell, Ingrid, Larhammar, Dan

Journal:

Year:

2013

Language:

english

File:

PDF, 896 KB

english, 2013

49

Isolation of Ef silicatein and Ef lectin as Molecular Markers Sclerocytes and Cells Involved in Innate Immunity in the Freshwater Sponge Ephydatia fluviatilis

Funayama, Noriko, Nakatsukasa, Mikiko, Kuraku, Shigehiro, Takechi, Katsuaki, Dohi, Mikako, Iwabe, Naoyuki, Miyata, Takashi, Agata, Kiyokazu

Journal:

Zoological Science

Year:

2005

Language:

english

File:

PDF, 1.44 MB

english, 2005

50

Mechanisms of endoderm formation in a cartilaginous fish reveal ancestral and homoplastic traits in jawed vertebrates

Godard, B. G., Coolen, M., Le Panse, S., Gombault, A., Ferreiro-Galve, S., Laguerre, L., Lagadec, R., Wincker, P., Poulain, J., Da Silva, C., Kuraku, S., Carre, W., Boutet, A., Mazan, S.

Journal:

Year:

2014

Language:

english

File:

PDF, 1.53 MB

english, 2014